Genomics (EBIO 5460)
To learn more about this course, see a description here.
| syllabus_2016_genomics.pdf |
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A list of our plastid and mitochondrial genomes on NCBI as of March 2015 is in the text file to the left.
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2016 class material
Contact information:
Nolan Kane (prof)- nolan.kane@colorado.edu
Kyle Keepers (TA) - kylekeepers@gmail.com
Jessica Persinger (LA) - Jessica.Persinger@colorado.edu
Nolan Kane (prof)- nolan.kane@colorado.edu
Kyle Keepers (TA) - kylekeepers@gmail.com
Jessica Persinger (LA) - Jessica.Persinger@colorado.edu
| trna.pdf |
| mitochondrial_genomes_part_2.pdf |
| dna_barcoding.pdf |
| mitochondrial_genomes.pdf |
| introns.pdf |
| submitting_data_to_ncbi.pdf |
| annotation2016.pdf |
| error_corrextion_2016.pdf |
| metagenomics.pdf |
| de_novo_assembly_2016.pdf |
| lichens__2_.pdf |
| class_6_-_reference-guided_assembly.pdf |
| class_5_dealing_with_large_files.pdf |
| class4_2016.pdf |
| class3_2016.pdf |
| 2_unix_2016.pdf |
| 1_intro_to_genomics2016.pdf |
Previous Course material
Course lectures - although much of the course is often more of a discussion or workshop rather than lecture-based, these slides may be helpful in documenting our discussions
Course lectures - although much of the course is often more of a discussion or workshop rather than lecture-based, these slides may be helpful in documenting our discussions
| annotation.pdf |
| evolution__genomics.pdf |
| barcoding_and_genomics.pdf |
| error_correction.pdf |
| soapdenovo_direct_search_of_parameter_space__2_.pdf |
| soapdenovo_assembly2015.pdf |
| de_novo_assembly_2015.pdf |
| genomics_2015_vim_posarg_github.pdf |
| de_novo_assembly2015.pdf |
| arabidopsis_chloroplasts.pdf |
| learning_awk.pdf |
| identifying_sequence_differences_with_samtools.pdf |
| using_unix_for_snp_genotyping_with_example2015.pdf |
| sequence_file_types2015.pdf |
| lecture2_2015.pdf |
| lecture1_2015.pdf |
| syllabus_2015_genomics.pdf |
Fall 2014 class - thanks for a great semester
