Genomics (EBIO 5460)
To learn more about this course, see a description here.

syllabus_2016_genomics.pdf | |
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A list of our plastid and mitochondrial genomes on NCBI as of March 2015 is in the text file to the left.
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2016 class material
Contact information:
Nolan Kane (prof)- nolan.kane@colorado.edu
Kyle Keepers (TA) - kylekeepers@gmail.com
Jessica Persinger (LA) - Jessica.Persinger@colorado.edu
Nolan Kane (prof)- nolan.kane@colorado.edu
Kyle Keepers (TA) - kylekeepers@gmail.com
Jessica Persinger (LA) - Jessica.Persinger@colorado.edu

trna.pdf | |
File Size: | 894 kb |
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mitochondrial_genomes_part_2.pdf | |
File Size: | 2152 kb |
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dna_barcoding.pdf | |
File Size: | 4480 kb |
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mitochondrial_genomes.pdf | |
File Size: | 1833 kb |
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introns.pdf | |
File Size: | 980 kb |
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submitting_data_to_ncbi.pdf | |
File Size: | 2036 kb |
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annotation2016.pdf | |
File Size: | 3696 kb |
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error_corrextion_2016.pdf | |
File Size: | 1454 kb |
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metagenomics.pdf | |
File Size: | 1607 kb |
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de_novo_assembly_2016.pdf | |
File Size: | 1033 kb |
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lichens__2_.pdf | |
File Size: | 3364 kb |
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class_6_-_reference-guided_assembly.pdf | |
File Size: | 925 kb |
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class_5_dealing_with_large_files.pdf | |
File Size: | 804 kb |
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class4_2016.pdf | |
File Size: | 778 kb |
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class3_2016.pdf | |
File Size: | 2591 kb |
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2_unix_2016.pdf | |
File Size: | 1341 kb |
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1_intro_to_genomics2016.pdf | |
File Size: | 5173 kb |
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Previous Course material
Course lectures - although much of the course is often more of a discussion or workshop rather than lecture-based, these slides may be helpful in documenting our discussions
Course lectures - although much of the course is often more of a discussion or workshop rather than lecture-based, these slides may be helpful in documenting our discussions

annotation.pdf | |
File Size: | 6009 kb |
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evolution__genomics.pdf | |
File Size: | 5607 kb |
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barcoding_and_genomics.pdf | |
File Size: | 2802 kb |
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error_correction.pdf | |
File Size: | 1794 kb |
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soapdenovo_direct_search_of_parameter_space__2_.pdf | |
File Size: | 295 kb |
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soapdenovo_assembly2015.pdf | |
File Size: | 3507 kb |
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de_novo_assembly_2015.pdf | |
File Size: | 5212 kb |
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genomics_2015_vim_posarg_github.pdf | |
File Size: | 261 kb |
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de_novo_assembly2015.pdf | |
File Size: | 1479 kb |
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arabidopsis_chloroplasts.pdf | |
File Size: | 3024 kb |
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learning_awk.pdf | |
File Size: | 288 kb |
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identifying_sequence_differences_with_samtools.pdf | |
File Size: | 2396 kb |
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using_unix_for_snp_genotyping_with_example2015.pdf | |
File Size: | 437 kb |
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sequence_file_types2015.pdf | |
File Size: | 7798 kb |
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lecture2_2015.pdf | |
File Size: | 1983 kb |
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lecture1_2015.pdf | |
File Size: | 5320 kb |
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syllabus_2015_genomics.pdf | |
File Size: | 192 kb |
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